Monday, 3 August 2009

Estimating dementia-free life expectancy for Parkinsons patients using Bayesian inference and microsimulation

Van den Hout and Matthews have a new paper in Biostatistics involving a random-effects Markov model with time (age) dependent intensities. The methodology is close to that used by Pan et al and Wu et al, using a WinBUGS/OpenBUGS Bayesian approach. They use a three-state illness-death model without recovery. A more sophisticated multivariate log-normal random effect on the effects of age on the intensities is used with a Wishart prior is used on the covariance matrix, which is more appropriate than the Gamma(e,e) type priors used by Pan et al. Like their recent Applied Statistics paper, time dependencies in the intensities are accounted for by assuming an individual that is observed at times t1 and t2 has a constant matrix of intensities between those points, but different assumptions are used to calculate life expectancies. The main methodological development is obtaining life expectancy estimates through 'microsimulation.' This is deemed necessary because there are two levels of variation: variation in the posterior of the parameters and variation from the random effects distribution conditional on the parameters. 'Microsimulation' (or simulation) just approximates the integral over the random effects distribution.

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